Cytoscape sessions open for NAHSL members

January 27, 2016 at 9:34 am | Posted in Continuing Education, Uncategorized | Leave a comment
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Rolando Garcia-Milian was one of our Jay Daly Technology Award winners.

His project was to bring in Marci Brandeburg from the University of Michigan, Taubman Health Sciences Library to present 2 workshops on Cytoscape.  Both workshops are being held on March 3, 2016 at the Yale School of Medicine in New Haven, CT.   Both workshops are free and open to NAHSL members.  Seating is limited so registration is required.

Thank you, Rolando.

Workshop information and registration:

Cytoscape: Going from Raw Data to a Publishable Image

These hands-on workshops will demonstrate the use of Cytoscape, an open source molecular interactions visualization tool. Cytoscape allows for the exploration of molecular interactions and biological pathways and integrates these networks with annotations, gene expression profiles, and other data.  One session, “Cytoscape:  Going from Raw Data to a Publishable Image,” will cover core functions, such as learning how to import network and attribute data, change visual properties to easily distinguish biologically significant relationships, create a legend for the image, manually add nodes/edges, etc.

Registration free, but limited seating : http://schedule.yale.edu/event.php?id=1048510

Date:   Thursday, March 3, 2016

Time: 9:00am – 12:00pm

Location:        C-103 – SHM 333 Cedar St, New Haven CT 06520

Campus:        Medical School

Presenter:      Marci Brandeburg, University of Michigan, Taubman Health Sciences Library

Cytoscape apps with a Focus on MetScape

Calendar: Medical Library Workshops

This hands-on workshop will provide an introduction to Cytoscape apps, which add functionality to the core software.  It will focus on a specific app example, MetScape, which is used to visualize and interpret metabolomics and gene expression data in the context of human metabolic networks.  A brief introduction to other apps, such as MCODE (cluster finding tool), SocialNetwork (builds co-publication networks), and MetDisease (annotates metabolic networks with MeSH disease terms) will be included.

Registration free, but limited seating: http://schedule.yale.edu/event.php?id=1048558

Date:   Thursday, March 3, 2016

Time: 1:30pm – 4:00pm

Location:        C-103 – SHM 333 Cedar St, New Haven CT 06520

Campus:        Medical School

Presenter:      Marci Brandeburg, University of Michigan, Taubman Health Sciences Library

 

 

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